Gene fusion preprints

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Preprint Authors Date Reviews & Comments Intersect Actions
Partner-independent fusion gene detection by multiplexed CRISPR/Cas9 enrichment and long-read Nanopore sequencing 18th Oct 2019
crispr nanopore Bookmark
The genomic landscape of metastasis in treatment-naive breast cancer models 24th Sep 2019
rnaseq Bookmark
CD8+ T-cell-mediated immunoediting influences genomic evolution and immune evasion in murine gliomas 17th Jul 2019
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Cytoplasmic protein granules organize kinase-mediated RAS signaling 17th Jul 2019
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RNA-Bloom provides lightweight reference-free transcriptome assembly for single cells 15th Jul 2019
rnaseq singlecell_rna_sequencing Bookmark
ProTECT: Prediction of T-cell Epitopes for Cancer Therapy 10th Jul 2019
Bookmark
Pseudogene associated recurrent gene fusion in prostate cancer 12th Jun 2019
Bookmark
Improved detection of gene fusions by applying statistical methods reveals new oncogenic RNA cancer drivers 4th Jun 2019
ncrna rnaseq Bookmark
Impact of RNA Extraction and Target Capture Methods on RNA Sequencing Using Formalin-Fixed, Paraffin Embedded Tissues 1st Jun 2019
rnaseq Bookmark
Tumor Evolution Decoder (TED): Unveiling Tumor Evolution Based on Mutation Profiles of Subclones or Single Cells 11th May 2019
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Long read sequencing reveals a novel class of structural aberrations in cancers: identification and characterization of cancerous local amplifications 30th Apr 2019
lung_cancer Bookmark
Probability-based detection of phosphoproteomic uncertainty reveals rare signaling events driven by oncogenic kinase gene fusion 29th Apr 2019
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Functional linkage of gene fusions to cancer cell fitness assessed by pharmacological and CRISPR/Cas9 screening 26th Feb 2019
crispr rnaseq Bookmark
The role of transposable elements and DNA damage repair mechanisms in gene amplification and protein domain shuffling in plant genomes 17th Jan 2019
recombination Bookmark
Hi-C detects novel structural variants in HL-60 and HL-60/S4 cell lines Dec 2018
rnaseq Bookmark
Reticulate evolution in eukaryotes: origin and evolution of the nitrate assimilation pathway Oct 2018
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Rapid and highly-specific generation of targeted DNA sequencing libraries enabled by linking capture probes with universal primers Sep 2018
cell_free_dna Bookmark
FirstSV: Fast and Accurate Approach of Structural Variations Detection for Short DNA fragments Sep 2018
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Complementary information on single nucleotide variants, INDELs and functional translocations can be obtained with RNAseq using different library preparations R. Panero...
R. A. Calogero
Apr 2018
rnaseq Bookmark
DNAJB1-PRKACA fusion kinase drives tumorigenesis and interacts with {beta}-catenin and the liver regenerative response. E. R. Kastenhuber...
S. W. Lowe
Sep 2017
crispr Bookmark