Genome assembly preprints

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Preprint Authors Date Reviews & Comments Intersect Actions
A chromosome-scale assembly of the major African malaria vector Anopheles funestus 11th Dec 2018
malaria Bookmark
Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long-read assembly and proximity ligation 9th Dec 2018
antibiotic_resistance metagenomics Bookmark
Nanopore sequencing significantly improves genome assembly of the eukaryotic protozoan parasite Trypanosoma cruzi 8th Dec 2018
nanopore Bookmark
MitoZ: A toolkit for mitochondrial genome assembly, annotation and visualization 8th Dec 2018
Bookmark
CompStor Novos: a low cost yet fast assembly-based variant calling for personal genomes 6th Dec 2018
Bookmark
Ultra-deep, long-read nanopore sequencing of mock microbial community standards 6th Dec 2018
metagenomics nanopore Bookmark
De novo assembly of the Pasteuria penetrans genome reveals high plasticity, host dependency, and BclA-like collagens. 5th Dec 2018
Bookmark
Shallow MinION sequencing to assist de novo assembly of the Streptococcus agalactiae genome 5th Dec 2018
nanopore Bookmark
The draft genome of an octocoral, Dendronephthya gigantea 5th Dec 2018
Bookmark
NucMerge: Genome assembly quality improvement assisted by alternative assemblies and paired-end Illumina reads 1st Dec 2018
Bookmark
FastqPuri: high-performance preprocessing of RNA-seq data 30th Nov 2018
rnaseq Bookmark
Choice of assembly software has a critical impact on virome characterisation 28th Nov 2018
metagenomics Bookmark
Population genome sequencing of the scab fungal species Venturia inaequalis, Venturia pirina, Venturia aucupariae and Venturia asperata. 28th Nov 2018
Bookmark
High-quality assembly of sweet basil genome 24th Nov 2018
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Long read-based de novo assembly of low complex metagenome samples results in finished genomes and reveals insights into strain diversity and an active phage system 23rd Nov 2018
crispr metagenomics methylation nanopore Bookmark
Hi-C yields chromosome-length scaffolds for a legume genome, Trifolium subterraneum 22nd Nov 2018
Bookmark
New approaches for assembly of short-read metagenomic data 10th Nov 2018
metagenomics Bookmark
Draft genome assembly and population genetics of an agricultural pollinator, the solitary alkali bee (Halictidae: Nomia melanderi) 9th Nov 2018
Bookmark
Genomic architecture and introgression shape a butterfly radiation 9th Nov 2018
recombination Bookmark
BELLA: Berkeley Efficient Long-Read to Long-Read Aligner and Overlapper 8th Nov 2018
Bookmark