Genome assembly preprints

See other preprint channels in Genomics.

Register as an editor for this theme. See keywords used to identify matching preprints

If you believe a preprint is missing from this list it is possible that we have not yet indexed it. Please use search function to help us index it.


Preprint Authors Date Reviews & Comments Intersect Actions
Draft genome of a porcupinefish, Diodon Holocanthus 21st Sep 2019
nanopore Bookmark
BITACORA: A comprehensive tool for the identification and annotation of gene families in genome assemblies 20th Sep 2019
Bookmark
Genome Sequencing and Transcriptome Analysis Reveal Recent Species-specific Gene Duplications in the Plastic Gilthead Sea Bream 20th Sep 2019
ncrna polyploid rnaseq Bookmark
A de novo chromosome-level genome assembly of Coregonus sp. \"Balchen\": one representative of the Swiss Alpine whitefish radiation 17th Sep 2019
Bookmark
Chromosome-scale de novo assembly and phasing of a Chinese indigenous pig genome 17th Sep 2019
bionano Bookmark
An improved de novo assembly and annotation of the tomato reference genome using single-molecule sequencing, Hi-C proximity ligation and optical maps 15th Sep 2019
bionano Bookmark
A high-quality reference genome assembly of the saltwater crocodile, Crocodylus porosus, reveals patterns of selection in Crocodylidae 13th Sep 2019
natural_selection Bookmark
Long transposon-rich centromeres in an oomycete reveal divergence of centromere features in Stramenopila-Alveolata-Rhizaria lineages 13th Sep 2019
malaria Bookmark
DeepMAsED: Evaluating the quality of metagenomic assemblies 11th Sep 2019
metagenomics Bookmark
SLR-superscaffolder: a de novo scaffolding tool for synthetic long reads using a top-to-bottom scheme 9th Sep 2019
linked_reads nanopore Bookmark
Four high-quality draft genome assemblies of the marine heterotrophic nanoflagellate Cafeteria roenbergensis 6th Sep 2019
Bookmark
De novo assembly of a Tibetan genome and identification of novel structural variants associated with high altitude adaptation 4th Sep 2019
natural_selection Bookmark
High throughput, high fidelity genotyping and de novo discovery of allelic variants at the self-incompatibility locus in natural populations of Brassicaceae from short read sequencing data 1st Sep 2019
Bookmark
GenomeScope 2.0 and Smudgeplots: Reference-free profiling of polyploid genomes 30th Aug 2019
polyploid Bookmark
Variant calling for cpn60 barcode sequence-based microbiome profiling 30th Aug 2019
metagenomics Bookmark
Chromosome-level hybrid de novo genome assemblies as an attainable option for non-model organisms 29th Aug 2019
Bookmark
Population Structure, Stratification and Introgression of Human Structural Variation in the HGDP. 29th Aug 2019
Bookmark
The Setaria viridis genome and diversity panel enables discovery of a novel domestication gene 25th Aug 2019
crispr Bookmark
SPAligner: alignment of long diverged molecular sequences to assembly graphs 24th Aug 2019
metagenomics Bookmark
Chromosome-level assemblies of multiple Arabidopsis thaliana accessions reveal hotspots of genomic rearrangements 24th Aug 2019
recombination Bookmark