Genome assembly preprints

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Preprint Authors Date Reviews & Comments Intersect Actions
Draft genome of a porcupinefish, Diodon Holocanthus 21st Sep 2019
nanopore Bookmark
BITACORA: A comprehensive tool for the identification and annotation of gene families in genome assemblies 20th Sep 2019
Genome Sequencing and Transcriptome Analysis Reveal Recent Species-specific Gene Duplications in the Plastic Gilthead Sea Bream 20th Sep 2019
ncrna polyploid rnaseq Bookmark
A de novo chromosome-level genome assembly of Coregonus sp. \"Balchen\": one representative of the Swiss Alpine whitefish radiation 17th Sep 2019
Chromosome-scale de novo assembly and phasing of a Chinese indigenous pig genome 17th Sep 2019
bionano Bookmark
An improved de novo assembly and annotation of the tomato reference genome using single-molecule sequencing, Hi-C proximity ligation and optical maps 15th Sep 2019
bionano Bookmark
A high-quality reference genome assembly of the saltwater crocodile, Crocodylus porosus, reveals patterns of selection in Crocodylidae 13th Sep 2019
natural_selection Bookmark
Long transposon-rich centromeres in an oomycete reveal divergence of centromere features in Stramenopila-Alveolata-Rhizaria lineages 13th Sep 2019
malaria Bookmark
DeepMAsED: Evaluating the quality of metagenomic assemblies 11th Sep 2019
metagenomics Bookmark
SLR-superscaffolder: a de novo scaffolding tool for synthetic long reads using a top-to-bottom scheme 9th Sep 2019
linked_reads nanopore Bookmark
Four high-quality draft genome assemblies of the marine heterotrophic nanoflagellate Cafeteria roenbergensis 6th Sep 2019
De novo assembly of a Tibetan genome and identification of novel structural variants associated with high altitude adaptation 4th Sep 2019
natural_selection Bookmark
High throughput, high fidelity genotyping and de novo discovery of allelic variants at the self-incompatibility locus in natural populations of Brassicaceae from short read sequencing data 1st Sep 2019
GenomeScope 2.0 and Smudgeplots: Reference-free profiling of polyploid genomes 30th Aug 2019
polyploid Bookmark
Variant calling for cpn60 barcode sequence-based microbiome profiling 30th Aug 2019
metagenomics Bookmark
Chromosome-level hybrid de novo genome assemblies as an attainable option for non-model organisms 29th Aug 2019
Population Structure, Stratification and Introgression of Human Structural Variation in the HGDP. 29th Aug 2019
The Setaria viridis genome and diversity panel enables discovery of a novel domestication gene 25th Aug 2019
crispr Bookmark
SPAligner: alignment of long diverged molecular sequences to assembly graphs 24th Aug 2019
metagenomics Bookmark
Chromosome-level assemblies of multiple Arabidopsis thaliana accessions reveal hotspots of genomic rearrangements 24th Aug 2019
recombination Bookmark