Nanopore sequencing preprints

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Theme editors: Lachlan Coin , Devika Ganesamoorthy

Preprint Authors Date Reviews & Comments Intersect Actions
Searching and mapping genomic subsequences in nanopore raw signals through novel dynamic time warping algorithms 10th Dec 2018
methylation Bookmark
Generating closed bacterial genomes from long-read nanopore sequencing of microbiomes 10th Dec 2018
metagenomics Bookmark
The genomic and proteomic landscape of the rumen microbiome revealed by comprehensive genome-resolved metagenomics 9th Dec 2018
metagenomics Bookmark
Nanopore sequencing significantly improves genome assembly of the eukaryotic protozoan parasite Trypanosoma cruzi 8th Dec 2018
genome_assembly Bookmark
MinION Nanopore Sequencing of Multiple Displacement Amplified Mycobacteria DNA Direct from Sputum 8th Dec 2018
antibiotic_resistance tuberculosis Bookmark
Culturomics of Aerobic Anoxygenic Phototrophic Bacteria in Wheat Phyllosphere Revealed a Divergent Evolutionary Pattern of Photosynthesis Genes in Methylobacterium spp. 7th Dec 2018
Ultra-deep, long-read nanopore sequencing of mock microbial community standards 6th Dec 2018
genome_assembly metagenomics Bookmark
Shallow MinION sequencing to assist de novo assembly of the Streptococcus agalactiae genome 5th Dec 2018
genome_assembly Bookmark
Nanopore direct RNA sequencing reveals modification in full-length coronavirus genomes 2nd Dec 2018
methylation recombination rnaseq Bookmark
Evaluating the Genome and Resistome of Extensively Drug-Resistant Klebsiella pneumoniae using Native DNA and RNA Nanopore Sequencing 1st Dec 2018
antibiotic_resistance rnaseq Bookmark
Rapid Sequencing of Multiple RNA Viruses in their Native Form 1st Dec 2018
rnaseq Bookmark
NanoARG: A web service for identification of antimicrobial resistance elements from nanopore-derived environmental metagenomes 30th Nov 2018
antibiotic_resistance metagenomics Bookmark
Repeat expansion and methylation state analysis with nanopore sequencing 29th Nov 2018
methylation tandem_repeats Bookmark
Transcriptome landscape of the developing olive fruit fly embryo delineated by Oxford Nanopore long-read RNA-Seq 25th Nov 2018
rnaseq Bookmark
Comparative assessment of long-read error-correction software applied to RNA-sequencing data 24th Nov 2018
rnaseq Bookmark
Noise-Cancelling Repeat Finder: Uncovering tandem repeats in error-prone long-read sequencing data 23rd Nov 2018
tandem_repeats Bookmark
Long read-based de novo assembly of low complex metagenome samples results in finished genomes and reveals insights into strain diversity and an active phage system 23rd Nov 2018
crispr genome_assembly metagenomics methylation Bookmark
High inter- and intraspecific turnover of satellite repeats in great apes 20th Nov 2018
Rapid Diagnosis of Capnocytophaga canimorsus Septic Shock in an Immunocompetent Individual Using Real-Time Nanopore Sequencing 17th Nov 2018
metagenomics sepsis streaming Bookmark
Illumina and Nanopore methods for whole genome sequencing of hepatitis B virus (HBV) 16th Nov 2018