Nanopore sequencing preprints

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Theme editors: Lachlan Coin


Preprint Authors Date Reviews & Comments Intersect Actions
Nanopore sequencing for the detection and the identification of Xylella fastidiosa subspecies and sequence types from naturally infected plant material Oct 2019
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High-quality chromosome-scale assembly of the walnut (Juglans regia L) reference genome Oct 2019
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Yersinia canariae sp. nov., isolated from a human yersiniosis case Oct 2019
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Partner-independent fusion gene detection by multiplexed CRISPR/Cas9 enrichment and long-read Nanopore sequencing Oct 2019
crispr gene_fusion Bookmark
LAMBDR: Long-range amplification and Nanopore sequencing of Mycobacterium bovis direct-repeat region. A novel method for in-silico spoligotyping of M. bovis directly from badger faeces. Oct 2019
tuberculosis Bookmark
Monitoring G-quadruplex formation with DNA carriers and solid-state nanopores Oct 2019
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High molecular weight DNA isolation method from diverse plant species for use with Oxford Nanopore sequencing Sep 2019
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Genomic evidence for revising the Escherichia genus and description of Escherichia ruysiae sp. nov. Sep 2019
genome_assembly Bookmark
Flossing DNA in a Dual Nanopore Device Sep 2019
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Molecular characterization of carbapenem-resistant Klebsiella pneumoniae isolates with focus on antimicrobial resistance Sep 2019
antibiotic_resistance Bookmark
Strain-level identification of bacterial tomato pathogens directly from metagenomic sequences Sep 2019
metagenomics Bookmark
The genome of Caenorhabditis bovis Sep 2019
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Draft genome of a porcupinefish, Diodon Holocanthus Sep 2019
genome_assembly Bookmark
Complete characterization of the human immune cell transcriptome using accurate full-length cDNA sequencing Sep 2019
rnaseq Bookmark
Identifying transposon insertions in bacterial genomes through nanopore sequencing Sep 2019
crispr Bookmark
SLR-superscaffolder: a de novo scaffolding tool for synthetic long reads using a top-to-bottom scheme Sep 2019
genome_assembly linked_reads Bookmark
GPU Accelerated Adaptive Banded Event Alignment for Rapid Comparative Nanopore Signal Analysis Sep 2019
methylation Bookmark
A sample-to-report solution for taxonomic identification of cultured bacteria in the clinical setting based on nanopore sequencing Aug 2019
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Direct microRNA sequencing using Nanopore Induced Phase-Shift Sequencing (NIPSS) Aug 2019
ncrna rnaseq Bookmark
Nanopore sequencing of the glucocerebrosidase (GBA) gene in a New Zealand Parkinsons disease cohort Aug 2019
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