Nanopore sequencing preprints

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Theme editors: Lachlan Coin

Preprint Authors Date Reviews & Comments Intersect Actions
Nanopore sequencing for the detection and the identification of Xylella fastidiosa subspecies and sequence types from naturally infected plant material Oct 2019
High-quality chromosome-scale assembly of the walnut (Juglans regia L) reference genome Oct 2019
Yersinia canariae sp. nov., isolated from a human yersiniosis case Oct 2019
Partner-independent fusion gene detection by multiplexed CRISPR/Cas9 enrichment and long-read Nanopore sequencing Oct 2019
crispr gene_fusion Bookmark
LAMBDR: Long-range amplification and Nanopore sequencing of Mycobacterium bovis direct-repeat region. A novel method for in-silico spoligotyping of M. bovis directly from badger faeces. Oct 2019
tuberculosis Bookmark
Monitoring G-quadruplex formation with DNA carriers and solid-state nanopores Oct 2019
High molecular weight DNA isolation method from diverse plant species for use with Oxford Nanopore sequencing Sep 2019
Genomic evidence for revising the Escherichia genus and description of Escherichia ruysiae sp. nov. Sep 2019
genome_assembly Bookmark
Flossing DNA in a Dual Nanopore Device Sep 2019
Molecular characterization of carbapenem-resistant Klebsiella pneumoniae isolates with focus on antimicrobial resistance Sep 2019
antibiotic_resistance Bookmark
Strain-level identification of bacterial tomato pathogens directly from metagenomic sequences Sep 2019
metagenomics Bookmark
The genome of Caenorhabditis bovis Sep 2019
Draft genome of a porcupinefish, Diodon Holocanthus Sep 2019
genome_assembly Bookmark
Complete characterization of the human immune cell transcriptome using accurate full-length cDNA sequencing Sep 2019
rnaseq Bookmark
Identifying transposon insertions in bacterial genomes through nanopore sequencing Sep 2019
crispr Bookmark
SLR-superscaffolder: a de novo scaffolding tool for synthetic long reads using a top-to-bottom scheme Sep 2019
genome_assembly linked_reads Bookmark
GPU Accelerated Adaptive Banded Event Alignment for Rapid Comparative Nanopore Signal Analysis Sep 2019
methylation Bookmark
A sample-to-report solution for taxonomic identification of cultured bacteria in the clinical setting based on nanopore sequencing Aug 2019
Direct microRNA sequencing using Nanopore Induced Phase-Shift Sequencing (NIPSS) Aug 2019
ncrna rnaseq Bookmark
Nanopore sequencing of the glucocerebrosidase (GBA) gene in a New Zealand Parkinsons disease cohort Aug 2019